PandemieGrippaleV1, 2020, Analysis, bibRecord, 000226

Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa

Identifieur interne : 000226 ( 2020/Analysis ); précédent : 000225; suivant : 000227

Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa

Auteurs : Martha I. Nelson [États-Unis] ; Richard Njouom [Cameroun] ; Cecile Viboud [États-Unis] ; Mbayame N. D. Niang [Sénégal] ; Hervé Kadjo [Côte d'Ivoire] ; William Ampofo [Ghana] ; Adedeji Adebayo [Nigeria] ; Zekiba Tarnagda [Burkina Faso] ; Mark A. Miller [États-Unis] ; Edward C. Holmes [États-Unis, Australie] ; Ousmane M. Diop [Sénégal]

Source :

The Journal of infectious diseases [ 0022-1899 ] ; 2014.

RBID : Pascal:14-0202063

Descripteurs français

Pascal (Inist)
- Afrique Ouest, Infection, Virus grippal A(H1N1).

English descriptors

KwdEn :
- Infection, Influenzavirus A(H1N1), West Africa.

Abstract

Our understanding of the global ecology of influenza viruses is impeded by historically low levels of viral surveillance in Africa. Increased genetic sequencing of African A/H1N1 pandemic influenza viruses during 2009-2013 revealed multiyear persistence of 2 viral lineages within West Africa, raising questions about the roles of reduced air traffic and the asynchrony of seasonal influenza epidemics among West African countries in the evolution of independent lineages. The potential for novel influenza virus lineages to evolve within Africa warrants intensified influenza surveillance in Africa and other understudied areas.

Affiliations:

Links toward previous steps (curation, corpus...)

to stream PascalFrancis, to step Corpus: 000050
to stream PascalFrancis, to step Curation: 001D69
to stream PascalFrancis, to step Checkpoint: 000069
to stream Main, to step Merge: 001070
to stream Main, to step Curation: 001061
to stream Main, to step Exploration: 001061
to stream 2020, to step Extraction: 000226

Links to Exploration step

Pascal:14-0202063

Le document en format XML

<record><TEI><teiHeader><fileDesc><titleStmt><title xml:lang="en" level="a">Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa</title>
<author><name sortKey="Nelson, Martha I" sort="Nelson, Martha I" uniqKey="Nelson M" first="Martha I." last="Nelson">Martha I. Nelson</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Njouom, Richard" sort="Njouom, Richard" uniqKey="Njouom R" first="Richard" last="Njouom">Richard Njouom</name>
<affiliation wicri:level="1"><inist:fA14 i1="02"><s1>National Influenza Center, Centre Pasteur du Cameroun</s1>
<s2>Yaoundé</s2>
<s3>CMR</s3>
<sZ>2 aut.</sZ>
</inist:fA14>
<country>Cameroun</country>
<wicri:noRegion>Yaoundé</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Viboud, Cecile" sort="Viboud, Cecile" uniqKey="Viboud C" first="Cecile" last="Viboud">Cecile Viboud</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Niang, Mbayame N D" sort="Niang, Mbayame N D" uniqKey="Niang M" first="Mbayame N. D." last="Niang">Mbayame N. D. Niang</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Institut Pasteur de Dakar</s1>
<s3>SEN</s3>
<sZ>4 aut.</sZ>
<sZ>11 aut.</sZ>
</inist:fA14>
<country>Sénégal</country>
<wicri:noRegion>Institut Pasteur de Dakar</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kadjo, Herve" sort="Kadjo, Herve" uniqKey="Kadjo H" first="Hervé" last="Kadjo">Hervé Kadjo</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>National Influenza Center, Institut Pasteur de Côte d'Ivoire</s1>
<s2>Abidjan</s2>
<s3>CIV</s3>
<sZ>5 aut.</sZ>
</inist:fA14>
<country>Côte d'Ivoire</country>
<wicri:noRegion>Abidjan</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Ampofo, William" sort="Ampofo, William" uniqKey="Ampofo W" first="William" last="Ampofo">William Ampofo</name>
<affiliation wicri:level="4"><inist:fA14 i1="05"><s1>Noguchi Memorial Institute for Medical Research, University of Ghana</s1>
<s2>Legon, Accra</s2>
<s3>GHA</s3>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Ghana</country>
<placeName><settlement type="city">Accra</settlement>
<region nuts="2">Région du Grand Accra</region>
</placeName>
<orgName type="university">Université du Ghana</orgName>
</affiliation>
</author>
<author><name sortKey="Adebayo, Adedeji" sort="Adebayo, Adedeji" uniqKey="Adebayo A" first="Adedeji" last="Adebayo">Adedeji Adebayo</name>
<affiliation wicri:level="1"><inist:fA14 i1="06"><s1>CDC-Nigeria, Federal Ministry of Health</s1>
<s2>Abuja</s2>
<s3>NGA</s3>
<sZ>7 aut.</sZ>
</inist:fA14>
<country>Nigeria</country>
<wicri:noRegion>Abuja</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Tarnagda, Zekiba" sort="Tarnagda, Zekiba" uniqKey="Tarnagda Z" first="Zekiba" last="Tarnagda">Zekiba Tarnagda</name>
<affiliation wicri:level="1"><inist:fA14 i1="07"><s1>Institut de Recherche en Sciences de la Santé</s1>
<s2>Bobo-Dioulasso</s2>
<s3>BFA</s3>
<sZ>8 aut.</sZ>
</inist:fA14>
<country>Burkina Faso</country>
<wicri:noRegion>Institut de Recherche en Sciences de la Santé</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Miller, Mark A" sort="Miller, Mark A" uniqKey="Miller M" first="Mark A." last="Miller">Mark A. Miller</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C." last="Holmes">Edward C. Holmes</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><inist:fA14 i1="08"><s1>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Biological Sciences and Sydney Medical School, University of Sydney</s1>
<s2>New South Wales</s2>
<s3>AUS</s3>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>Australie</country>
<placeName><settlement type="city">Sydney</settlement>
<region type="état">Nouvelle-Galles du Sud</region>
</placeName>
<orgName type="university">Université de Sydney</orgName>
</affiliation>
</author>
<author><name sortKey="Diop, Ousmane M" sort="Diop, Ousmane M" uniqKey="Diop O" first="Ousmane M." last="Diop">Ousmane M. Diop</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Institut Pasteur de Dakar</s1>
<s3>SEN</s3>
<sZ>4 aut.</sZ>
<sZ>11 aut.</sZ>
</inist:fA14>
<country>Sénégal</country>
<wicri:noRegion>Institut Pasteur de Dakar</wicri:noRegion>
</affiliation>
</author>
</titleStmt>
<publicationStmt><idno type="wicri:source">INIST</idno>
<idno type="inist">14-0202063</idno>
<date when="2014">2014</date>
<idno type="stanalyst">PASCAL 14-0202063 INIST</idno>
<idno type="RBID">Pascal:14-0202063</idno>
<idno type="wicri:Area/PascalFrancis/Corpus">000050</idno>
<idno type="wicri:Area/PascalFrancis/Curation">001D69</idno>
<idno type="wicri:Area/PascalFrancis/Checkpoint">000069</idno>
<idno type="wicri:explorRef" wicri:stream="PascalFrancis" wicri:step="Checkpoint">000069</idno>
<idno type="wicri:doubleKey">0022-1899:2014:Nelson M:multiyear:persistence:of</idno>
<idno type="wicri:Area/Main/Merge">001070</idno>
<idno type="wicri:Area/Main/Curation">001061</idno>
<idno type="wicri:Area/Main/Exploration">001061</idno>
<idno type="wicri:Area/2020/Extraction">000226</idno>
</publicationStmt>
<sourceDesc><biblStruct><analytic><title xml:lang="en" level="a">Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa</title>
<author><name sortKey="Nelson, Martha I" sort="Nelson, Martha I" uniqKey="Nelson M" first="Martha I." last="Nelson">Martha I. Nelson</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Njouom, Richard" sort="Njouom, Richard" uniqKey="Njouom R" first="Richard" last="Njouom">Richard Njouom</name>
<affiliation wicri:level="1"><inist:fA14 i1="02"><s1>National Influenza Center, Centre Pasteur du Cameroun</s1>
<s2>Yaoundé</s2>
<s3>CMR</s3>
<sZ>2 aut.</sZ>
</inist:fA14>
<country>Cameroun</country>
<wicri:noRegion>Yaoundé</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Viboud, Cecile" sort="Viboud, Cecile" uniqKey="Viboud C" first="Cecile" last="Viboud">Cecile Viboud</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Niang, Mbayame N D" sort="Niang, Mbayame N D" uniqKey="Niang M" first="Mbayame N. D." last="Niang">Mbayame N. D. Niang</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Institut Pasteur de Dakar</s1>
<s3>SEN</s3>
<sZ>4 aut.</sZ>
<sZ>11 aut.</sZ>
</inist:fA14>
<country>Sénégal</country>
<wicri:noRegion>Institut Pasteur de Dakar</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Kadjo, Herve" sort="Kadjo, Herve" uniqKey="Kadjo H" first="Hervé" last="Kadjo">Hervé Kadjo</name>
<affiliation wicri:level="1"><inist:fA14 i1="04"><s1>National Influenza Center, Institut Pasteur de Côte d'Ivoire</s1>
<s2>Abidjan</s2>
<s3>CIV</s3>
<sZ>5 aut.</sZ>
</inist:fA14>
<country>Côte d'Ivoire</country>
<wicri:noRegion>Abidjan</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Ampofo, William" sort="Ampofo, William" uniqKey="Ampofo W" first="William" last="Ampofo">William Ampofo</name>
<affiliation wicri:level="4"><inist:fA14 i1="05"><s1>Noguchi Memorial Institute for Medical Research, University of Ghana</s1>
<s2>Legon, Accra</s2>
<s3>GHA</s3>
<sZ>6 aut.</sZ>
</inist:fA14>
<country>Ghana</country>
<placeName><settlement type="city">Accra</settlement>
<region nuts="2">Région du Grand Accra</region>
</placeName>
<orgName type="university">Université du Ghana</orgName>
</affiliation>
</author>
<author><name sortKey="Adebayo, Adedeji" sort="Adebayo, Adedeji" uniqKey="Adebayo A" first="Adedeji" last="Adebayo">Adedeji Adebayo</name>
<affiliation wicri:level="1"><inist:fA14 i1="06"><s1>CDC-Nigeria, Federal Ministry of Health</s1>
<s2>Abuja</s2>
<s3>NGA</s3>
<sZ>7 aut.</sZ>
</inist:fA14>
<country>Nigeria</country>
<wicri:noRegion>Abuja</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Tarnagda, Zekiba" sort="Tarnagda, Zekiba" uniqKey="Tarnagda Z" first="Zekiba" last="Tarnagda">Zekiba Tarnagda</name>
<affiliation wicri:level="1"><inist:fA14 i1="07"><s1>Institut de Recherche en Sciences de la Santé</s1>
<s2>Bobo-Dioulasso</s2>
<s3>BFA</s3>
<sZ>8 aut.</sZ>
</inist:fA14>
<country>Burkina Faso</country>
<wicri:noRegion>Institut de Recherche en Sciences de la Santé</wicri:noRegion>
</affiliation>
</author>
<author><name sortKey="Miller, Mark A" sort="Miller, Mark A" uniqKey="Miller M" first="Mark A." last="Miller">Mark A. Miller</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
</author>
<author><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C." last="Holmes">Edward C. Holmes</name>
<affiliation wicri:level="2"><inist:fA14 i1="01"><s1>Fogarty International Center, National Institutes of Health</s1>
<s2>Bethesda, Maryland</s2>
<s3>USA</s3>
<sZ>1 aut.</sZ>
<sZ>3 aut.</sZ>
<sZ>9 aut.</sZ>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>États-Unis</country>
<placeName><region type="state">Maryland</region>
</placeName>
</affiliation>
<affiliation wicri:level="4"><inist:fA14 i1="08"><s1>Marie Bashir Institute for Infectious Diseases and Biosecurity, School of Biological Sciences and Sydney Medical School, University of Sydney</s1>
<s2>New South Wales</s2>
<s3>AUS</s3>
<sZ>10 aut.</sZ>
</inist:fA14>
<country>Australie</country>
<placeName><settlement type="city">Sydney</settlement>
<region type="état">Nouvelle-Galles du Sud</region>
</placeName>
<orgName type="university">Université de Sydney</orgName>
</affiliation>
</author>
<author><name sortKey="Diop, Ousmane M" sort="Diop, Ousmane M" uniqKey="Diop O" first="Ousmane M." last="Diop">Ousmane M. Diop</name>
<affiliation wicri:level="1"><inist:fA14 i1="03"><s1>Institut Pasteur de Dakar</s1>
<s3>SEN</s3>
<sZ>4 aut.</sZ>
<sZ>11 aut.</sZ>
</inist:fA14>
<country>Sénégal</country>
<wicri:noRegion>Institut Pasteur de Dakar</wicri:noRegion>
</affiliation>
</author>
</analytic>
<series><title level="j" type="main">The Journal of infectious diseases</title>
<title level="j" type="abbreviated">J. infect. dis.</title>
<idno type="ISSN">0022-1899</idno>
<imprint><date when="2014">2014</date>
</imprint>
</series>
</biblStruct>
</sourceDesc>
<seriesStmt><title level="j" type="main">The Journal of infectious diseases</title>
<title level="j" type="abbreviated">J. infect. dis.</title>
<idno type="ISSN">0022-1899</idno>
</seriesStmt>
</fileDesc>
<profileDesc><textClass><keywords scheme="KwdEn" xml:lang="en"><term>Infection</term>
<term>Influenzavirus A(H1N1)</term>
<term>West Africa</term>
</keywords>
<keywords scheme="Pascal" xml:lang="fr"><term>Afrique Ouest</term>
<term>Infection</term>
<term>Virus grippal A(H1N1)</term>
</keywords>
</textClass>
</profileDesc>
</teiHeader>
<front><div type="abstract" xml:lang="en">Our understanding of the global ecology of influenza viruses is impeded by historically low levels of viral surveillance in Africa. Increased genetic sequencing of African A/H1N1 pandemic influenza viruses during 2009-2013 revealed multiyear persistence of 2 viral lineages within West Africa, raising questions about the roles of reduced air traffic and the asynchrony of seasonal influenza epidemics among West African countries in the evolution of independent lineages. The potential for novel influenza virus lineages to evolve within Africa warrants intensified influenza surveillance in Africa and other understudied areas.</div>
</front>
</TEI>
<affiliations><list><country><li>Australie</li>
<li>Burkina Faso</li>
<li>Cameroun</li>
<li>Côte d'Ivoire</li>
<li>Ghana</li>
<li>Nigeria</li>
<li>Sénégal</li>
<li>États-Unis</li>
</country>
<region><li>Maryland</li>
<li>Nouvelle-Galles du Sud</li>
<li>Région du Grand Accra</li>
</region>
<settlement><li>Accra</li>
<li>Sydney</li>
</settlement>
<orgName><li>Université de Sydney</li>
<li>Université du Ghana</li>
</orgName>
</list>
<tree><country name="États-Unis"><region name="Maryland"><name sortKey="Nelson, Martha I" sort="Nelson, Martha I" uniqKey="Nelson M" first="Martha I." last="Nelson">Martha I. Nelson</name>
</region>
<name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C." last="Holmes">Edward C. Holmes</name>
<name sortKey="Miller, Mark A" sort="Miller, Mark A" uniqKey="Miller M" first="Mark A." last="Miller">Mark A. Miller</name>
<name sortKey="Viboud, Cecile" sort="Viboud, Cecile" uniqKey="Viboud C" first="Cecile" last="Viboud">Cecile Viboud</name>
</country>
<country name="Cameroun"><noRegion><name sortKey="Njouom, Richard" sort="Njouom, Richard" uniqKey="Njouom R" first="Richard" last="Njouom">Richard Njouom</name>
</noRegion>
</country>
<country name="Sénégal"><noRegion><name sortKey="Niang, Mbayame N D" sort="Niang, Mbayame N D" uniqKey="Niang M" first="Mbayame N. D." last="Niang">Mbayame N. D. Niang</name>
</noRegion>
<name sortKey="Diop, Ousmane M" sort="Diop, Ousmane M" uniqKey="Diop O" first="Ousmane M." last="Diop">Ousmane M. Diop</name>
</country>
<country name="Côte d'Ivoire"><noRegion><name sortKey="Kadjo, Herve" sort="Kadjo, Herve" uniqKey="Kadjo H" first="Hervé" last="Kadjo">Hervé Kadjo</name>
</noRegion>
</country>
<country name="Ghana"><region name="Région du Grand Accra"><name sortKey="Ampofo, William" sort="Ampofo, William" uniqKey="Ampofo W" first="William" last="Ampofo">William Ampofo</name>
</region>
</country>
<country name="Nigeria"><noRegion><name sortKey="Adebayo, Adedeji" sort="Adebayo, Adedeji" uniqKey="Adebayo A" first="Adedeji" last="Adebayo">Adedeji Adebayo</name>
</noRegion>
</country>
<country name="Burkina Faso"><noRegion><name sortKey="Tarnagda, Zekiba" sort="Tarnagda, Zekiba" uniqKey="Tarnagda Z" first="Zekiba" last="Tarnagda">Zekiba Tarnagda</name>
</noRegion>
</country>
<country name="Australie"><region name="Nouvelle-Galles du Sud"><name sortKey="Holmes, Edward C" sort="Holmes, Edward C" uniqKey="Holmes E" first="Edward C." last="Holmes">Edward C. Holmes</name>
</region>
</country>
</tree>
</affiliations>
</record>

Pour manipuler ce document sous Unix (Dilib)

EXPLOR_STEP=$WICRI_ROOT/Sante/explor/PandemieGrippaleV1/Data/2020/Analysis

HfdSelect -h $EXPLOR_STEP/biblio.hfd -nk 000226 | SxmlIndent | more

HfdSelect -h $EXPLOR_AREA/Data/2020/Analysis/biblio.hfd -nk 000226 | SxmlIndent | more

Pour mettre un lien sur cette page dans le réseau Wicri

{{Explor lien
   |wiki=    Sante
   |area=    PandemieGrippaleV1
   |flux=    2020
   |étape=   Analysis
   |type=    RBID
   |clé=     Pascal:14-0202063
   |texte=   Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa
}}

This area was generated with Dilib version V0.6.34.
Data generation: Wed Jun 10 11:04:28 2020. Site generation: Sun Mar 28 09:10:28 2021

	Serveur d'exploration sur les pandémies grippales
	Attention, ce site est en cours de développement ! Attention, site généré par des moyens informatiques à partir de corpus bruts. Les informations ne sont donc pas validées.

Serveur d'exploration sur les pandémies grippales

Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa

Multiyear Persistence of 2 Pandemic A/H1N1 Influenza Virus Lineages in West Africa

Source :

Descripteurs français

English descriptors

Abstract

Links toward previous steps (curation, corpus...)

Links to Exploration step

Le document en format XML

Pour manipuler ce document sous Unix (Dilib)

Pour mettre un lien sur cette page dans le réseau Wicri